https://ogma.newcastle.edu.au/vital/access/ /manager/Index en-au 5 Molecular manipulation of microRNA397 abundance influences the development and salt stress response of arabidopsis thaliana https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:38723 Wed 19 Jan 2022 10:04:17 AEDT ]]> Developmental biology and induction of phi thickenings by abiotic stress in roots of the brassicaceae https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:34905 Brassica, both B. oleracea and B. napus demonstrated the formation of phi thickenings, but in a strongly cultivar-specific manner. Confocal microscopy of phi thickenings showed that they form a complex network of reinforcement surrounding the inner root cortex, and that a delicate, reticulate network of secondary wall deposition can also variously form on the inner face of the cortical cell layer with phi thickenings adjacent to the endodermal layer. Results presented here indicate that phi thickenings can be induced in response to salt and water stress and that wide variation occurs in these responses even within the same species.]]> Tue 03 Sep 2019 17:58:15 AEST ]]> Overexpression of sly-miR398b increased salt sensitivity likely via regulating antioxidant system and photosynthesis in tomato https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:38531 2.- under normal and saline conditions, and consequently suffered from more severe oxidative damage. Further analyses revealed that overexpression of sly-miR398b downregulated the expression of CSD, APX and CAT, leading to the reduced activities of SOD, APX and CAT, and the contents of reduced glutathione. In addition, the transgenic plants exhibited lower rates of photosynthesis and higher photoinhibition under salinity in comparison with the wild type plants. The data provide new evidence on the miR398 mediated ROS metabolism network underlying salt stress response in tomato.]]> Thu 28 Oct 2021 15:00:53 AEDT ]]> Molecular manipulation of the miR399/PHO2 expression module alters the salt stress response of arabidopsis thaliana https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:45368 Thu 27 Oct 2022 15:02:22 AEDT ]]> Profiling of the salt stress responsive MicroRNA landscape of C4 genetic model species Setaria viridis (L.) beauv https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:42559 Thu 25 Aug 2022 11:05:11 AEST ]]> Profiling of the differential abundance of drought and salt stress-responsive microRNAs across grass crop and genetic model plant species https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:33146 Poaceae family of grasses, namely; maize (Zea mays L.), wheat (Triticum aestivum L.) and rice (Oryza sativa L.). It is, therefore, of significant concern that all three of these Poaceae grass species are susceptible to a range of abiotic stresses, including drought and salt stress. Highly conserved among monocotyledonous and dicotyledonous plant species, microRNAs (miRNAs) are now well-established master regulators of gene expression, influencing all aspects of plant development, mediating defense responses against pathogens and adaptation to environmental stress. Here we investigate the variation in the abundance profiles of six known abiotic stress-responsive miRNAs, following exposure to salt and drought stress across these three key Poaceae grass crop species as well as to compare these profiles to those obtained from the well-established genetic model plant species, Arabidopsis thaliana (L.) Heynh. Additionally, we outline the variables that are the most likely primary contributors to instances of differential miRNA abundance across the assessed species following drought or salt stress exposure, specifically; (1) identifying variations in the experimental conditions and/or methodology used to assess miRNA abundance, and; (2) the distribution of regulatory transcription factor binding sites within the putative promoter region of a MICRORNA (MIR) gene that encodes the highly conserved, stress-responsive miRNA. We also discuss the emerging role that non-conserved, species-specific miRNAs play in mediating a plant’s response to drought or salt stress.]]> Thu 21 Oct 2021 12:52:38 AEDT ]]> Profiling the abiotic stress responsive microRNA landscape of Arabidopsis thaliana https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:37780 Arabidopsis thaliana (Arabidopsis) can be readily molecularly manipulated, therefore offering an excellent experimental system to alter the profile of abiotic stress responsive miRNA/target gene expression modules to determine whether such modification enables Arabidopsis to express an altered abiotic stress response phenotype. Towards this goal, high throughput sequencing was used to profile the miRNA landscape of Arabidopsis whole seedlings exposed to heat, drought and salt stress, and identified 121, 123 and 118 miRNAs with a greater than 2-fold altered abundance, respectively. Quantitative reverse transcriptase polymerase chain reaction (RT-qPCR) was next employed to experimentally validate miRNA abundance fold changes, and to document reciprocal expression trends for the target genes of miRNAs determined abiotic stress responsive. RT-qPCR also demonstrated that each miRNA/target gene expression module determined to be abiotic stress responsive in Arabidopsis whole seedlings was reflective of altered miRNA/target gene abundance in Arabidopsis root and shoot tissues post salt stress exposure. Taken together, the data presented here offers an excellent starting platform to identify the miRNA/target gene expression modules for future molecular manipulation to generate plant lines that display an altered response phenotype to abiotic stress.]]> Thu 21 Oct 2021 12:52:36 AEDT ]]> Molecular manipulation of the mir396/grf expression module alters the salt stress response of arabidopsis thaliana https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:49797 Fri 02 Jun 2023 17:08:29 AEST ]]>